Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQRTLSIIKPDALKKKVVGKIIDRFESNGLEVVAMKRLHLSVKDAENFYAIHRERPFFKDLIEFMVSGPVVVMVLEGKDAVAKNRELMGATDPKLAQKGTIRADFAESIDANAVHGSDSLENAHNEIAFFFAAREF
4EK2 Chain:B ((8-137))
--ERTLSIIKPDAVAKNVIGQIYSRFENAGLKIVAARMAHLSRADAEKFYAVHAERPFFKDLVEFMISGPVMIQVLEGEDAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSDAPETARVEIAFFFPEMNV
General information:
TITO was launched using:
RESULT:
Template:
4EK2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54715 for 1020 contacts (-53.6/contact) +
2D Compatibility (PS) -13682 + (NN) -968 + (LL) 272
1D Compatibility (HY) -13200 + (ID) 4600
Total energy: -86893.0 ( -85.19 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_4EK2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EK2-query.scw
PDB file :
Tito_Scwrl_4EK2.pdb
: