Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MISNISIHPKTMFKNALNIQDFSFKNHTSTAIIGTNGAGKSTLINTILGIRS----DYNFKAQNNNIPYHDNVIPQRKQLGVVSNLFNYPPGLNANDLFKFY-------QFFHKNCTLDLFE----KNLLNKTYEHLSDGQKQRLKIDLALSHHPQLVIMDEPETSLEQNALIRLSNLIS-LRNTQQLTSIIATHDPIVLDS-CEWVLLLKNGNIAQYKPLNSILKSVAKTFNFKEKPTTKDLLALLKDI------------------------------------------------------------------------------------------------------------ |
| 1OXS Chain:C ((1-352)) | MVRIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYD----------NPVSIQVASLIGEINELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OXS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90540 for 1748 contacts (-51.8/contact) +
2D Compatibility (PS) -23781 + (NN) -10199 + (LL) 776
1D Compatibility (HY) -10000 + (ID) 2600
Total energy: -136344.0 ( -78.00 by residue)
QMean score : 0.409
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