Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLKRAKTKAQQIKELLLKHYPNQTTELRH---KNPYELLVATILSAQCTDARVNQITPKLFEKYPSVNDLALASLEEVKEIIQSVSYSNNKSKHLISMGAKVVKDFKGVIPSTQKELMSLDGVGQKTANVVLSVCFDANYIAVDTHVFRTTHRL-GLSNANTPIKTEEELSDLFKD-----NLSKLHHALILFGRYTCKAKNPLCDACFLKEFCVSKASFKA--------------------------------------------------------------------------------------------------------------------------------- |
| 1RRQ Chain:A ((12-362)) | --------PAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGY-YSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVNGNVMRVLSRLFLVTDDIAKCSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMVKQVPLAVAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGADGKEKLEQMVGLQVELTEPIVSFEHAFSHLVWQLTVFPGRLVHGGPVEEPYRLAPEDELKAYAFPVSHQRVWREYKEWA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RRQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107872 for 1607 contacts (-67.1/contact) +
2D Compatibility (PS) -21725 + (NN) -11661 + (LL) 752
1D Compatibility (HY) -13200 + (ID) 2300
Total energy: -156006.0 ( -97.08 by residue)
QMean score : 0.507
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