Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------MKATQSTINDFFALTGTIFSIPVYQRNYTWEEENCEKLLQDIVNISQNKK---------------THFMGSITYILHLIDDEKSLRQLQEF-----------------VIIDGQQRITTIM----------LLLKAIETKIQNEGIKKEIDGLLNLSGQRLRLKPIKSDKEAFDLVMQNRSHEIQGVSHIKNNYKFFTKELDNYISKGYRIEEIYGAFLWLKIVAIGLELGEDDPQVVFESINATGVQLKGLDLIRNYLMMGENSDNQNRLYNTYWVPLENWLGEKDLNDFIKTYLRIYFEDRVKEGEREVYYALKAHHRDNFPNNIQGLMSDMREYGRIFQIFLD------RDHYFLHRGDPQQLANLRLRVKDLVKIKFGVAKPFVLRCARDFEE-GKLDYENFHEILQILISYFVRRSVCGDS-TPTLTRVLYSLYRQLGEDVSADALKRYLGKSV----GQMAFPNDDKIKAAFLVRN---------------------AYAANQVCKFILLEIEKLSNAEPPKEENLEVEHFYPKTPT-----------QEWRDR----------VGDYFTFEQDYLNN-FGNLTL--------SGQNQRLGNKSYEAKIALMEEYSSLHLN----DYFTNNTDSWG--IEEVRARSEYLADQFCQVGL-FKDLPKEYRARELHKTLDDNLTNHNLQSVKLPNDQRRMAGNAKELASVV------IDYLLENAREAFESYTDDESQKYIYWSKAKAEAR-------DRDGTLVVPFEK-----YGFYFVSNASYQTTGSNLKDLILGCNLNPRDFVVE---------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4MT1 Chain:A ((2-1040)) | AKFFIDRPIFAWVISIFIIAAGIFGIKSLPVSQYPSVAAPTITLHAIYPGASAQVMEGSVLSVIERNMNGVEGLDYMSTSADSSGSGSVSLTFTPDTDENLAQVEVQNKLSEVLSTLPATVQQYGVTVSKARSNFLMIVMLSSDVQSTEEMNDYAQRNVVPELQRIEGVGQVRLFGAQRAMRIWVDPKKLQNYNLSFADVGSALSAQNIQISAGSIGSLPAVRGQTVTATVTAQG-----QLGTAEEFGNVILRANTDGSNIYLKDVAKVGLGMEDYSSSTRLNGVNTTGMAVMLSNSGNAMATAKAVKERLAVLEKYFPQGMSWKTPYDTSKFVEISIEKVIHTLIEAMVLVFVVMYLFLQNIRYTLIPTIVVPISLLGGFAFISYMGMSINVLTMFAMILVIGIVVDDAIVVVENVERIMAGEGLPPKEATKKAMGQISGAVIGITAVLISVFVPLAMFSGAAGNIYKQFALTMASSIAFSAFLALTLTPALCATGFFGWFNKKFDSWTHGYEGRVAKVLRKTFRMMVVYIGLAVVGVFLFMRLPTSFLPTEDQGFVMVSVQLPAGATKERTDATLAQVTQLAKS-IPEIENIITVSGFSFSGSGQNMAMGFAIFKDWNERTASGSDAVAVAGKLTGMMMGTLKDGFGIAVVPPPILELGSGLSINLQDRNNTGHTALLAKRNELIQKMRASGLFDPSTVRAGGLEDSPQLKIDINRAAAAAQGISFADIRTALASALSSSYVSDFPNQGRLQRVMVQADEDARMQPADILNLTVPNKSGVAVPLSTIATVSWENGTE-QSVRFNGYPSMKLSASPATGVSTGQAMEAVQKMVDELGGGYSFEWGGQSSEEAKGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVTGRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAALEAARLRFRPIIMTSFAFILGVVPLYIAAGASSASQRAIGTTVFWGMLVGTLLSVFLVPLFYVVVRKFF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17796 for 4550 contacts (3.9/contact) +
2D Compatibility (PS) -68924 + (NN) -356 + (LL) 660
1D Compatibility (HY) -9200 + (ID) 4900
Total energy: -64924.0 ( -14.27 by residue)
QMean score : 0.109
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