Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRFFILFFMGMLGVGFSQTELDLKDLEKKPAGIVRDYYLWRYISDKKTS----LENAKKAYEL--------TQNKNSALQKAMQEKGVENSDKSPDAKMPEDIYCKQITLESMLETTDAFQASCIAIALKSKIRDFDKIPIQTFKPLQEKIKEAYPILYEELEILQSKNVSASLFKANAQVFSALFNHLSYEKKLQIFEKHIPIKELNRLLDEDYPAFNRLIYQVILDPKLDHFKDALAKSNATQSNAQTFFILGINEILHKKTSKALKYFERSEAVVKDDDFSKDRAIFWQYLASKKKKTLEHLSQSPALNLYSLYASRKLKTTPSYRIISHIQNLSQENPPFNTYDPFSWQIFKEKTLSLKDEGAFNAMLKSLYYEKSAPELTYLLSQRNKDKIYYYLSPYEGIIEWQNTDERAMAYAIARQESFLLPALISRSFALGLMQIMPFNVGPFAKSLGMDNVDLNDMFNPNIALKFGNYYLNHLKKEF-------NHPLFVAYAYNAGPGFLRRWLESSKRFKGKNHFEPWLSMELMPYSETRMYGFRVMLNYLIYQEIFGNFIPIDAFLEQTLNSKDKP |
| 4P0G Chain:A ((7-435)) | ----------------APTALERVQKEGVLRVITRNSPAT-YFQDRNGETGFEYELAKRFAERLGVELKIETADNLDDLYAQLSREG------GPA------LAAAGLTPGREDDASVRYSHTYLDVT-----------PQIIYRNGQQRPTRPEDLVGKRIMVLKGSSHAEQLAELKKQ-----YPELKYEES-----DAVEVVDLLRMVDVGDIDL------TLVD------SNELAMNQVYFPNVRVAFDFG--------EARGLAW-----ALPGGDDDSLMNEVNAFLDQAKKEGLLQRLKDRYY---------------------GHVDVLG-------------------------------------------YVGAYTFAQHLQQRLPRYESHFKQSGKQLDTDWRLLA-AIGYQESLWQPGATSKTGVRGLMML---------TNRTAQAMGVSNRLDPKQSIQGGSKYFVQIRSELPESIKEPDRSWFALAAYNIGGAHLEDARKMAEK-EGLNPNKWLDVKKMLPRLAQKQWYAKTRYGYARGGETVHFVQNVRRYYDILTWVTQPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73811 for 3405 contacts (-21.7/contact) +
2D Compatibility (PS) -43296 + (NN) -7724 + (LL) 11032
1D Compatibility (HY) -4000 + (ID) 3850
Total energy: -121649.0 ( -35.73 by residue)
QMean score : 0.214
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