Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFKNKKWLFLAPLAGYTDLPFRSVVKKFGVDVTTSEMVSSHSLVY-------------------AF---DKTS-KML---EKSPLEDHFMAQISGSKESVVKEAVEKINALDHVSGIDFNCGCPAPKVANHGNGSGLLKDLNHLVEILKVIRENTNKKITSVKVRLGFEKKIPKEIAHALNDAPVDYVVVHGRTRS----------------DRYQKD---KIDYESIALMKKILKKPVIANGEIDSVKKAFEVLQITQADGLMIGRATLRAPWIFWQIRNNTTELPAVVKKDLVLEHFDKMVEFYGDRGVIMFRKNLHAYAKGEMQASAFRNCVNTLTEIKSMRESIEEFFNQEMLQSEVPLWVELNQKSV |
| 1EP3 Chain:A ((12-287)) | PGLDLKNPIIPASGCFGFGEEYAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGLQNPGLEVIMTEKLPWLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVK----HGGQAFGTDPEVAAALVKACKAVSKVP-LYVKLSPNVT--DIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANAQDVLEMYM-AGASAVAVGTANFADPFVCPKIIDKLPELMDQYRIESLESLIQEVKEGKK----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92730 for 2044 contacts (-45.4/contact) +
2D Compatibility (PS) -24417 + (NN) -10498 + (LL) 6364
1D Compatibility (HY) -7200 + (ID) 1850
Total energy: -130331.0 ( -63.76 by residue)
QMean score : 0.376
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