Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MLVDSFNRVIDYIRVSVTKQCNFRCQYCMPTTP----LDFFDDEELLPLDNVLEFLKIAIDEGVKKIRITGGEPLLRKGLDEFIAKLHAYNKEVALVLSTNGFSLKKMAKGLKDAGLSRVNVSLDSLKSDRVLKISQKDA-LKNTLEGIEESLKVGLKLKLNTVVMKGVNDDEILELLEYAKNRSIQIRYIEFMENTHAKSLVKG--LKEKEILDLIAQKYKIMGMEKPKQG-SSKIYTLEN-GYQFGIIAPHSDDFCQSCNRIRLASDGKICPCLYYQ-DAIDAKEAII-NKDTKMMKRLLKQSIINKPEKNMWNDKNGGTPTRAFYYTGG |
| 1TV8 Chain:A ((3-329)) | EQIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFYGCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQ------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140704 for 2489 contacts (-56.5/contact) +
2D Compatibility (PS) -34511 + (NN) -24469 + (LL) 24
1D Compatibility (HY) -26800 + (ID) 5950
Total energy: -232410.0 ( -93.37 by residue)
QMean score : 0.460
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