Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTNFEKIIAQNRLKTNAVLTTYCAIFAFIGLLVDAIRINANDLGIALFKLMTFQIFPTITIVMFVVAFVIILVCIQNFSSIMLSGDEYKLIDPSKVLSSKENQIHRLLLELLEEAKLHFEPKLYIINAPYMNAFASGWDESNSLIALTSALIERLDRDELKAVIAHELSHIRHNDIRLTMCVGILSNIMLLVANFSVYFFMGNRKNSGANLARMILWVL---QIILPFLTLLLQMYLSRTREYMADSGAAFLMHDNKPMIRALQKISNDYTNNDYKEIDKNSTRSAAYLFNAEMFSTHPSIKNRIQSLRKRVI
1JAY Chain:A ((1-212))-----------------------MRVALLG--------GTGNLGKGLALRLATL----------------------GHEIVVGSRREEKAEAKAAEYRRIAGDAS---ITGMKNEDAAEACDIAVLTIP---------------------------WEHAIDTARDLKNILR-------------EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFANLDEKF---DWDVPVCGDDDESKKVVMSLISEIDG--LRPLDAGPLSNSRLVESLTPLILNIMRFNGMGELGIKFL


General information:
TITO was launched using:
RESULT:

Template: 1JAY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -154764 for 1807 contacts (-85.6/contact) +
2D Compatibility (PS) -22021 + (NN) -2977 + (LL) 10212
1D Compatibility (HY) 400 + (ID) 1050
Total energy: -170200.0 ( -94.19 by residue)
QMean score : 0.353

(partial model without unconserved sides chains):
PDB file : Tito_1JAY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JAY-query.scw
PDB file : Tito_Scwrl_1JAY.pdb: