Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTYNVAIVGASGAVGQELIKGLENSFFPIKKFVPLASARSAGKKIRAFNKDYEILETTHEVFEKEEIDIAFFSAGGSVSEEFAISASK-TALVIDNTSFFRLNKDVPLVVPEINAQEIFN-APLNIIANPNCSTIQMTQILNPLHLHFKIKSVIVSTYQAVSGAGNKGIESLKNELKTALEHLEKDPAIDL-NQVLQAGAFAYPIAFNAIAHIDTFK--ENGYTKEELKMVHETHKIMGV-DFPISATCVRVPVLRSHSESLSIAFEKEFDLKEVYEVLKNAPSVVVCDDPSHNLYPTPLKASHTDSVFIGRLRKDLFD--KKTLHGFCVADQLRVGAATNALKIALHYIKNA |
| 3TZ6 Chain:A ((1-342)) | --GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAE--TADPSGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLAGSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQPLSPERARELLDGATGVQLVD------VPTPLAAAGVDESLVGRIRRDPGVPDGRGLALFVSGDNLRKGAALNTIQIAELLTA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200292 for 2989 contacts (-67.0/contact) +
2D Compatibility (PS) -34968 + (NN) -8263 + (LL) 380
1D Compatibility (HY) -15200 + (ID) 5800
Total energy: -264143.0 ( -88.37 by residue)
QMean score : 0.431
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