Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIKACYQNAQALLEGHFLLSSGFHSNYYLQSAKVLEDPKLAEQLALELAKQIQEA-HLNIECVCSPAIGGILAGYELARALGVRFIFTERV---DNT--------------MTLRRGFEVKKNEKILVCEDIITTGKSAMECAKVLEEKGAQIVAFGALANRGICKRAHSHLKAQEGACLPSHLPLFALEDFVFDMHKPSSCPLCATSVAIKPGSRGN
1ZN8 Chain:A ((5-180))
--ELQLVEQ-RIRSFPDFPTP-G---VVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDA-LEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSL---------KGREKLA-PVPFFSLLQYE-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZN8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124444 for 1237 contacts (-100.6/contact) +
2D Compatibility (PS) -17106 + (NN) -2010 + (LL) 1828
1D Compatibility (HY) -8800 + (ID) 1350
Total energy: -151882.0 ( -122.78 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_1ZN8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZN8-query.scw
PDB file :
Tito_Scwrl_1ZN8.pdb
: