Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKSNKKSNHLRAIYRAL--VIAIGLAVIIVFNYFNRKNNNARSSRRA--CSCFFSLTGVNLEKIGSFDTGAKLIVLN-HQSLLDIIYLEAYHPSNICWIAKKELGEIPFYGHALTDTGMILIDREDKKGIVSLLKA----CKEKLDQNRPLVIF-PEGTRGKGGEKFLPFKQGAKI--------------------IAEKFQLKIQPMV---LINSIKIFNSKP-----LEAYKA----RTRLVMLESYTPDFSSPTWYEELQERMQKEYLKHYHELNA |
| 4P0P Chain:B ((62-389)) | RMKAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPSEDREDWVEEPTVLVLLRAEAFVSMIDNGKTLQGFVTDITAKTAGK--ALSLVIVDQEKCFVSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAGGVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLLADIQVRRTSRRIGPELSRRIYLQMTTLQPHLSL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4P0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -22940 for 1531 contacts (-15.0/contact) +
2D Compatibility (PS) -24005 + (NN) -2433 + (LL) 64
1D Compatibility (HY) -7600 + (ID) 1950
Total energy: -58864.0 ( -38.45 by residue)
QMean score : 0.159
|
|
|