Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MGFLFEKSLMGFCAHSIKIIKVTGLILSFLAAFLVAEDTHEPEE---IKAKVAYVKIPQ-LEDLENTPVYIGQTIGVT---------------YDLLL-----FDAEFLEAKIKDGWDKTQIELLNKMPK--WKK--------VEKELFRATYYYKIKGIRASIP----------SLEVSAFSNKDKYIDHSIAPKVALQVTDLSKNPRYANVM----AKDLQVVQ---YKTKD------------YDDKNN----ILVMEL--AFKEA----NWEDFH----------VKEAIKQGFD----NASLNQIKAKEGSVFYY--------CVLPKT------LQNLSFDYFSLSNRQF---------KTLSFSAIPTQDTTGIQSDLIPKN--NFLVFSNVALL--------------------ALCVFF----LALFFI--FGRKLIFLGLGILCLGFVLY----------NLLFTQKSALLLAHKKI---RILPTQNSTILGLSRDEMPI--KILGSHDDYYKILTP--HEQIGWVKKDEVK- |
| 3WPU Chain:A ((3-540)) | GLQDGPEPTIHTQQAYAPEDDFTAKWTRADARQLQRMSDPTAPSRENSMPASVTMPTVPQDFPDMSNEQVWVWDTWPLTDEDANQYSVNGWEIIFSLVADRNLGFDDRHVFAKIGYFYRPAGVPAAERPENGGWTYGGLVFKEGVTGQIFEDQSFSHQTQWSGSARVSKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQNEFFNFRDPFTFEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNKQLTEWEFLPPILSANCVTDQTERPQIYFKDGKSYLFTISHRGTFAAGLDGPEGVYGFVG------DGIRSDYQPLNGGSGLALGNPTNLNFLGGQPFAPDFNQHPGHFQAYSHYVMPGGLVQSFIDTIGTHDDFVRGGTLAPTVKMDIGVGGDPTKTAVDYSYGSEGLGGWADIPANKHLFTNGKFGVAVSDEAAQKIRKILGSKFDDYLDGKPVSATVRALIEKLLAQY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 215837 for 3761 contacts (57.4/contact) +
2D Compatibility (PS) -38145 + (NN) 16443 + (LL) 212
1D Compatibility (HY) -5600 + (ID) 4250
Total energy: 184497.0 ( 49.06 by residue)
QMean score : 0.166
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