Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSSNDLFMVVLGAILLVLVCLVGYLYLKEKEFYHKMRRLEKTLDESYQENYLYSKRLRELEGRLEGL--SLEKSAKEDSSLKTTLSHLYNQLQEIQKSMDKERDYLEEKIITLENKFKDMGHYAASDEVNEKQVLKMYQEGYSVDSISKEFKVSKGEVEFILNMAGLKW |
4QKW Chain:A ((3-103)) | --------------------------PVSALSILSLLERVSTIIDGVQASQQRMEERQQQLEGSVSAVQSELLKLARDHGATATTVDKLLQKARRVSTHVKEVRSRVEKQNVRVKKVETTQDELLTR------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3616 for 385 contacts (9.4/contact) +
2D Compatibility (PS) -10859 + (NN) -7150 + (LL) 6224
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -12469.0 ( -32.39 by residue)
QMean score : 0.494
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