Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MRKLIQFLFIAV-----VLFLVEYVLINQAAILFLVTSGIIQLCGVIIAIRLLLFDQRNTSSKVAWVAVIFILPVLGTISYLVFGRNPATRKFSTAQVKEKT-KLINA--IHAIPNNTNEKLPRLSKRIAHLTSIE-PIK---GNKIEILTNGEETF---PVLLDALRKAENHIHIQYYIFKT----DAISTEIRDILVEKAKSGVEVRFMFDGLGSSKLGKAFLAPLKEAGVSIHAFDPIASPWIVRTANLRNHRKIVVI---DGQIGFTGGL-NIG-------EEYRSNTPDFRVWRDTHIKITGQAVIELQESFLNDWVYMENQAGAADGF----------ISESGSKQYFSPVDMGD----EWAQVIYGGPYDKEKWVR-------DSMLDLIDSAKESVWIVSPYFVPDEESLAVIRRVAMSGV--DVRVIIPGKGDRGISFHGSNAYVKTMIEAGAKMYAYADDSFV----HAKAMLV-DGTRAAIGT-------ANFDVRSFRLNHELMVFLY-------DESEAMHHLKRDFKKDFEDSRLFTMK--------------DMENKPLLTRIKEVLSSLLSPIL------------------------------- |
| 4UNM Chain:A ((8-615)) | KYHQYKINQPEYKAANGKWEIIEFPEKYRQNTIHAALLRTGKVLMVAGS--------GNNQDNSDDKQYDTRIW-DPVKGTIKKVPTPSDL----FCTGHTQLANGNLLIAGGTKRYEKLKGDVTKAGGLMVVHNENPDKPITLPAGTKFTGKENGKTFVSKDPVLVPRAEKVRNDPGLGRIYVEAQKSGSAYETGTEDNYRVQGLSGADARNTYGIAQKLALDKKDFQGIRD----AFEFDPVAEKYIKVDPMHEARWYPTLTTLGDGKILSVSGLDDIGQLVPGKNEVYDPKTKAWTYTDKVRQFPTYPALFLMQ----NGKIFY---SGANAGYGPDDVGRTPGVWDVETNKFTKVPGMSDANMLETANTVLLPPAQDEKYMVIGGGGVGESKLSSEKTRIADLKADDPKFVDGP-SLEKGTRYPQASILPDDSVLVSGGSQDYRGRGDSNILQARLYHPDTNEFERVADPLVGRNYHSGSILLPDGRLMFFGSDSLYADKANTKPGKFEQRIEIYTPPYLYRDSRPDLSGGPQTIARGGSGTFTSRAASTVKKVRLIRPSASTHVTDVDQRSIALDFKADGDKLTVTVPSGKNLVQSGWYMMFVTDGEGTPSKAEWVRVP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UNM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129943 for 3694 contacts (-35.2/contact) +
2D Compatibility (PS) -50618 + (NN) 7552 + (LL) 2716
1D Compatibility (HY) -1200 + (ID) 5100
Total energy: -176593.0 ( -47.81 by residue)
QMean score : 0.157
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