Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LYQMKNKLQVKIPGKLYVAGEYAVVESGHTAILTAVNRYITLTLEDSERNELWIPHYENPVSWPVGGELKPDGEHWTFTAEAINIATTFLKSEGIELTPVKMIIETELIDQSGAKYGLGSSAAATVAVINALMTKFYPEISMLKKFKLAALSHLVVQGNGSCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPVPTFSVGWTGTPVSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIMKQIIQAFHTKDEELLYSAIKENRRILQELGTKAGVNIETSLLKELADSAENMG-GAGKSSGSGGGDCGIAFSKTKELAEKLVNEWEKLGIKHLPFHTGRVQITE |
| 2OI2 Chain:A ((4-292)) | -----KVGVGQAHSKIILIGEHAVVYGYPAISLPLLEVEVTCKVVPAESP---------------------------WRLYEEDTLSMAVYASLEYLNITEACIRCEI----DEKRGMGSSAAISIAAIRAVFDYYQADLPHDVLEILVNRAEMIAHMNPSGLDAKTCLSDQPIRFIK-NVGFTELEMDLS----------------------AYLVIADTGVYGHTREAIQVVQNKG----KDALPFLHALGELTQQAEIAISQKDAEGLGQILSQAHLHLKEIG------VSSLEADSLVETALSHGALGAKMSGGGLGGCIIALVTNLTHAQELAERLEEKGAVQTWIESL------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2OI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -121813 for 2586 contacts (-47.1/contact) +
2D Compatibility (PS) -30774 + (NN) -12329 + (LL) 5056
1D Compatibility (HY) -3600 + (ID) 2950
Total energy: -166410.0 ( -64.35 by residue)
QMean score : 0.376
|
|
|