Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSRKKGIILVLSVILIFSIGLLVNNLMTNNKDTAKPKKKTVAAVKKKKETPPKPKEPFNIDFTGDIMFDWDLRPV-LAEKGMDYPFNNVREELKSSDYTFVDLETAITTRTKKVPYQEFWIKSDPSSLTALKNAGVDMVNISNNHILDYYEDGLLDTTAALRANNLAYVGAGKNEDEAYQLKVADIKGNKVGFMSFCHFF--PNTGWIADEDTPGVTNGYDLNLVEEK---IKEERAKNKDIDYMVVYFHW--GVEKTNT--PVDYQTQYVKKLVDDNLVDAIVASHPHWLQGFEVYKD------VPIAYSLGNFLFPDYVSGHSAETGIYKLNFDQGKVTAHFDPGIISGNQINMLEGSSKTAQLNYLQSISPNATINSNGDISAK
4HNE Chain:A ((2-384))----------------------------PLGSPEFAAQAQALAAQAAAAAHAAQAHRERN-EFPEDPEFEAVVRQAELAIERCIFPERIYQG--SSGSYFVKDPQGRIIAVFKP-KNEEPYGHLNPKWTKWLQKFGRD-CLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNYSAIDRVKSRGKRLALRFNRIGLPPKVGSFQLFVEGYKDADYWLRRFEAEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKI-SDPNFVKDLEEDLYELFKKDPGFDRGQFH-KQIAVMRGQILNLTQALKDNKSPLHLVQMPPVIVET


General information:
TITO was launched using:
RESULT:

Template: 4HNE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 44556 for 2415 contacts (18.4/contact) +
2D Compatibility (PS) -34718 + (NN) 1784 + (LL) 3808
1D Compatibility (HY) -6000 + (ID) 3000
Total energy: 6430.0 ( 2.66 by residue)
QMean score : 0.089

(partial model without unconserved sides chains):
PDB file : Tito_4HNE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HNE-query.scw
PDB file : Tito_Scwrl_4HNE.pdb: