Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------MNKTIEMD-GTTYDFTYEDLVWSITFPKSKTR--AKELAQLEL-LEKPATHFTPAKISSDSDSYTISYEIAPRTYGFEQ-VRKMGREDKLRALRNIADLGELLNTRYTFFLHPDNLIFDI-----NLVPSIVHRGIKNILPPYELTEETFFKQYQCFVIAMFSKKFSFENLY-NGSLSG-----------ARGTQFEKSILDAKTVQDIAT------------------------------ILEEAYMKEHAAVQKNMASVPKKKYSTFRGLAV-GFIIVAILLAIPVSYFAFVKVPLQNDLLTANENFLKTDYDKVITGLENVD----------PEKMPQSVQYELAYSYVKGEKMSDKKKENIMNTISLKSDAKNLLYWIYNGRGEFSKSLDIAKLLDDPTLAMYSLTKQIEQVQSDTTLSGDEKVEKL-KTLEESLKEYDEK-VNESTTTEDETTNTEAK------ |
| 2AR0 Chain:A ((6-529)) | NDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKMCKETGQEAEYLPEGYRWDDLKSRIGQEQLQFYRKMLVHLGEDDKKLVQAVFHNVSTTITEPKQITALVSNMDSLDWQYFTPRPLIKT--IIHLLKPQ------PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTNMPSFGKRTPFTDEHLQPFERVYGEDPHGLSPRTEGEWSFNAEETEVADSEENK--NTDQHLATSRWRKFSREWIRTAKSDSLDISWLKDKDP-EPDVLAAEAMGELVQALSELDALMRELGASDEADLQRQLLEEAFGGV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AR0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3512 for 2705 contacts (-1.3/contact) +
2D Compatibility (PS) -39363 + (NN) 3849 + (LL) 884
1D Compatibility (HY) 8000 + (ID) 2350
Total energy: -32492.0 ( -12.01 by residue)
QMean score : 0.155
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