Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKINTTTFNPQILYIANCYTNEVRVGENHHHDFLEISIICEGNVIYD------------IEGERVKLGKGDMLIFNPGVSHY-D---------------ITEPGMTNAQLHIGFRNFA-------LEGYTRNTFPFKKAFLRKKEEESA----ILS-ISKQIIEE---KDAGKPGYDLILKAFVMQLIIHVLRE-ATPE------------------------QLENNGVKLSTDEQQKQIL-VNEI---IH-YM------------EKHHTEDVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIRLTRAEELLKNKDVSVKQAANMVGY-----------------NDAYYFSKLFKKYYG---FPPSENWRKS-S-------- |
| 4DNH Chain:A ((2-387)) | LVSIDLPIEGRLARYDLT---GRPVPFNSRDAKAFSRVAFAAAHVVADPLADNDPWLAPAIDWERTLAFRHRLWDLGLGVAESMDTAQRGMGLGWPEARELIRRSLAEARGRPDALIACGAGTDHLAPGPDVSIDDILAAYESQIEAIEAEGGRIILMASRALAAAAKGPEDYIRVYDRVLSQVKEPVIIHWLGEMFDPALEGYWGNADHMAAMKTCLDVLEAHAAKVDGIKISLLSKEKEIVMRRQLPKGVRMYTGDDFNYAELIAGDEEGHSDALLGIFDAIAPVASAALEALGSGR--NGEFFELLEPTVPLSRHIFKAPTRFYKTGVVFLAYLNGLQDHFVMIGGQQSARSLVHLAELFRLADKAGALADPELATARMRRVLAMHGV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DNH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35163 for 1947 contacts (-18.1/contact) +
2D Compatibility (PS) -28282 + (NN) 1434 + (LL) 80
1D Compatibility (HY) -5200 + (ID) 2100
Total energy: -69231.0 ( -35.56 by residue)
QMean score : 0.142
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