Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYEKALAFIKSNSTLEQEEGTEVIFKQAQETARGNLDPFLLKDLK-QHLGGTNDAIKEAPQEIQMPDFSNLEIATAAALQMRATMGSPN--IDLS-NGVTTEYRVVEGDYGDIPVRIYRHEEATKPVPAFIFYHGGGFVGGTPAVVENFCKGIAEKLPAVVINVDYHLAPEFPAPAAPKDCYRVLEWVVEQSNELGIDASKIGVSGDSAGGTLAAAVSYMDYEAET--NYVGFQALLYPALTLVDEDNDKYQWDISKFGASEDTLPLVAPGIIGMNSSGELLRKAYVRD-ENPAAPIYSPLSAVDKSIYPPTLIASAEFDALRAFADVFAKELRASGVQTKAIVYQGMCHAFIDKYGIFPQAEDVADEIVQMMKEIF |
| 3GA7 Chain:A ((13-322)) | ---------------------------------LTRLSDEMTAVVNFQQ----------------------------DIETQRQYYLLERRFWNADAPSMTTRTCAVPTPYGDVTTRLYSPQP--TSQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQARYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVSRRLFG--GAWD-----------GLTR-E-DLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLIDDSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GA7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175618 for 2623 contacts (-67.0/contact) +
2D Compatibility (PS) -31333 + (NN) -17256 + (LL) 5784
1D Compatibility (HY) -14800 + (ID) 3550
Total energy: -236773.0 ( -90.27 by residue)
QMean score : 0.500
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