Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIKSQKSFSGTSQGALYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHFEITTRMT-SYH-QFTKENKEDNIIQRMLGGEVVALVSDAGMPSISDPGYELVQSALDANIPVIPLPGANAALTALIASGLAP----QPFYFYGFLPRQNKERTQAIEKLAAREETWILYESPHRLKETLKAIIKI-TGNDRKIVLCRELTKRFEEFLRGTVEDALNWAMDEEIRGEFCLIIEGNSNPQLAEEQLWWQELDIKTHVSTVMEQENVSSKDAIKTVMKARNLPKREVYSAYHEIK |
| 1VA0 Chain:A ((1-225)) | -------------GRVYLVGAGPGDPELLTLKAYRLLKEAPVVLYDR-LVDERVLALAPGE-KVYVGKEE--KQEEIHRLLLRHARAHPFVVRLK-GGDPMVFGRGGEEVLFLLRHGVPVEVVPGVTSLLA--SGLPLTHRGLAHGFAAVSGVLEGGG--YPDLRPFA-RVPTLVVLMGVGRRVWIAKELLRLGRDPREPTLFVERASTPKERRVHARLEEVAEGKV--EVRPPALWILGEVVRVF------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145942 for 1771 contacts (-82.4/contact) +
2D Compatibility (PS) -23178 + (NN) -10408 + (LL) 6756
1D Compatibility (HY) -9600 + (ID) 1950
Total energy: -184322.0 ( -104.08 by residue)
QMean score : 0.453
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