Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKFTKLMQGYLHLIEGKNEKIKPILLETKPNFTTDSVLETASWLWLSSKINHYDREEVEPVIAFLVENWNRPEKSIWGSAENDIYLATISSVYSALLDVKNTFPKPELQQTITIIRDYCFDNLLKGDSILTGFNTRKVSTDQLLSVLPFGLFSPEDLVMVAAVGKMEQQLVQDDGVLPYSGAPRVNSFATALMALYFLEKSDQDKALHYLNMAMKMEDNDELGAIFIEINQAFRAMESEVTAHISHDPFGHENRYEQQLTERTPHYPETEMHFSAACEVISEVEPIQVELVLKEKDWTILCEKKEKNDVQIWEALVPPLEEVGEYTYYFQATMKDQTTLTSDDYKVEPIWKHWSEEAAICETEQGLMVLFKENPSSIIPVEFTVKSDELVIGLKPSFEASNVKTKSSGQLKKDDLEIIVSNNPVRLEVHFKGKLILESHKIYPALQWYTDKTGTINKVKLHLDAPKEEEYYGFGERYNALGQRGNVLDCFVYNQ--YRDQGTRTYIPMPFYHTNRDYSVFVDTARYTSFDLGNQLADKHTITVEINGCDTDICLLMG-DIRSAVANYMKKTGKPAMVPVWALGPWMSSNNWDRESVVRNEVETTQELQIPSTVVVLEQWSDEATYYMFNDAEYDEKAPSEAYSYDEIRFPSWGRWPDPKGMVDYIHDNKMKLILWQIPIQKYLNRQQHPLKDREEAYMIEKGYVVKNPDGSPYRIPENWFTESLIMDFSNEEGKKWWFDKRQYLIDIGVDGFKTDGGEF-VFGEGLQFADGRRGDEMRNLYPNDYVEAYYQFAQQNEG----MTFSRAGYTGAQNFPAH-WAGDERSTFDAFRRSLIAGLSAGFSGIPFWSFDFAGF-NGDIPTAELFIRSAEMATFCPIMQYHAESKAEFNQDRTPWNIASRTGDDSVIPIYRHFANVRMNILPYIYNESLKCVETGLPMMRALLLDYKEDPRVSDMYDQYLFGEAMLIAPVIEDGVRSREVYLPEGTWYDFWNGTKVS-GPTLRKCKADKEEIPVFVRGGKAVLCNVDA---------TLKLGSWVGNTVEEYDTPLLKVYLD-GDFTEEITDHLFGKWLVKVTENADEVIVSVQTNTASY---------------------EVEVIGTTKKVQIKKGR-------------------------------- |
| 4BA0 Chain:A ((35-817)) | ---------------------------------------------------------------AVFYKEHKLRNDGLVITTNQGNIRLQFKS---------------------------------------------------------------EAAIEVLY-------------------------------------------------------------------------------------------------------RADSKQLPSFALA----------------------------------------------------------------------------------------------QPESAIKAQLTETENHLQFSGGT-------------------LTARIQKRPFAISYYRDSELLLAEESGFQV-----------NKINFRFYLSPGEKILGGGQRILGMDRRGQRFPLYNRAHYGYSDHSGQMYFGLPAIMSSKQYILVFDNSASGAMDIGKT--ESDILQLEAKSGRSAYILVAGNSYPSLIENFTQVTGRQPLPPRWALGSFASRFGYRSEAETRATVQKYKTEDFPLDTIVLD-------LYWFGK---DIKGHMGNLDWDK------ENFPTPLDMMADFKQQGVKTVLITEPFVL--------TSSKRWDDAVKAKALAKDPQGQPKA-FELYFGNGGIIDVFSKEGSRWFSSIYKDLSKQGVAGWWGDLGEPEMHPEDTQHAIGD-ADTVHNAYGHRWAEMLYQQQLDQFPELRPFIMMRAGFVGSQRYGMIPWTGDVSRTWGGLASQVELALQMSLLGFGYIHSDLGGFADGETLDKEMYIRWLQYGVFQPVYRPHGQDHI----PSEPVFQ-----DEETKAILRPLVKLRYRMLPYIYTAAYQNTLTGMPLMRPLFFSDEKNPALIDNKTSYFWGDSLLVTPITQAGVESVSIPAPKGVWFDFWKDTRYQTDGAPLTLPTDLHTIPVLVKAGAFMPYVPAVSTTEDYRSDSLEIHYYADASVP---LAQGEIFEDDGKDPNSIKRNQFDLLTLQATHTDNQLHFQLARTGKGYRGMPERRATTLVIHNASDQYQHLDINGKTIAIAQADCASTPALACYDQERRQLQLVFTWGREALNLRLHK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -306545 for 6303 contacts (-48.6/contact) +
2D Compatibility (PS) -76201 + (NN) -26686 + (LL) 28788
1D Compatibility (HY) -36000 + (ID) 7900
Total energy: -424544.0 ( -67.36 by residue)
QMean score : 0.494
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