Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNISDIIEAYLKQVLESSEAVEIKRSEIADKFECVPSQINYV--INTRFTMERGYIVESKRGGGGYI----RIIKVKMNDK-LQLLEAIIS-----------------------MVHDKKVSQSFSEDV--------------------ILRLLEE---EVITKKEARLMVAALDREVLILPLP----DRDILRSRILEAMLVALKYD-------- |
| 4LJO Chain:A ((8-223)) | AQGLAMYLQENGIDCPKCKFSYALARGGCM-HFHCTQCRHQFCSGCYNAFYAKNKCPEPNCRVKKSLHGHHPRDCLFYLRDWTALRLQKLLQDNNVMFNTEPPAGARAVPGGGCRVIEQKEVPNGLRDEACGKETPAGYAGLCQAHYKEYLVSLINAHSLDPATLYEVEELETATERYLHVRPQPLAGEDPPAYQARLLQKLTEEVPLGQSIPRRRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37765 for 861 contacts (-43.9/contact) +
2D Compatibility (PS) -15612 + (NN) 509 + (LL) -76
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -59144.0 ( -68.69 by residue)
QMean score : 0.228
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