Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VDNSVNQEELAMLELARSGDTEALEYFFSKYQSVIYWKSTQYFLQGAERDDLIQEAMIGLFKAIRDYDKTKEASFRSFAEMCINRQLLSAVKRASRQKNIPLNNSVSLDTPMAEDDVDWTLLDVISEKAAETPEDFLIKNEDLTHVARQLEQVTSEFEKEVLKQYLEGKSYQEMALFFNKKEKAIDNALQRVKKKMMKQLE-
1OR7 Chain:A ((-1-187))
-HMSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRY-VPSGDVPDVVQEAFIKAYRALDSFRG--DSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENF------------------ESGGANLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQP
General information:
TITO was launched using:
RESULT:
Template:
1OR7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24844 for 1133 contacts (-21.9/contact) +
2D Compatibility (PS) -19684 + (NN) -14578 + (LL) 2024
1D Compatibility (HY) -7600 + (ID) 1350
Total energy: -66032.0 ( -58.28 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_1OR7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OR7-query.scw
PDB file :
Tito_Scwrl_1OR7.pdb
: