Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISIVLVSHSQKITEGLQEMIVEMVGDTVHIISSGGTGDG--RLGT------------------NAIMIADNIATCTNSEHIYIFCDI-GSAILSAETALELLDTDLLEKTTIIDAPLVEGAFTAAVQSLVNPSKEAILQELTNVH
1OI2 Chain:A ((56-143))
----------------------------VALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHD-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1OI2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30341 for 312 contacts (-97.2/contact) +
2D Compatibility (PS) -6403 + (NN) -6021 + (LL) 6324
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -41241.0 ( -132.18 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_1OI2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OI2-query.scw
PDB file :
Tito_Scwrl_1OI2.pdb
: