Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VTEKTIRLTTAQALVKFLNQQYIEVDDEMAPFVDGIFTVFGH--GNVVGIGQALEEDPGHLNVYQGKNEQGMAHAAIAYAKQKNRKRIYACSASAGPGSANLITAASTALANNLPVLFLPADTFATRQPDPVLQQLEHESSAAITTNDGFQAVSRYFDRVQRPEQLMSALIRAFEVMTNPASAGPATICIAQDTEGEAFDYPVEFFQKRIHYLNR-----QIPTKRELTEAARLIQASKTPVIIVGGGARYSDAREELIALSEQSNIPLVETHAGKSTVEFDFKNNLGG-TGILGTLAANKAIRDADLVIGIGTRYTDFTTSSKTAFGPATKFININVSRMQTYKLDAFQVVG--DAKATLAELAPLLKGYQTQFGDRIAVYKAEWLAERTRLQNTKFNREAFTPEIKDQFDQATLNEYADSLQTEFTQTEALITINDTVAPDSIVVCSAGSLPGDLQRLWNPAVPNTYHLEYGYSCMGYEINGALGAKMAAANNQEVYSIVGDGSFCMSHSELLTSLQYGKKINIMLFDNSGFGCINNLQMANGSDSFFCEFRDSDNQIMQVDYAKIAEGYGAKVYRANTKEDLISALED--AKKQTKTTLIDMKVLPKTMSEGYLNWWNVGVSEVSNKESIKQAYEEKQTNLKNARLY |
| 1POX Chain:A ((1-542)) | -----TNILAGAAVIKVLEAW-------------GVDHLYGIPGGSINSIMDALSAERDRIHYIQVRHEEVGAMAAAADAKLTGK--IGVCFGSAGPGGTHLMNGLYDAREDHVPVLALIGQFGTTGMNM--DTFQE-M-----NENPIYADVADYNVTAVNAATLPHVIDEAIRRAYA-HQ-GVAVVQIPVDLPWQQISAEDWYASANNYQTPLLPEPDVQAVTRLTQTLLA----AERPLIYYGIGAR--KAGKELEQLSKTLKIPLMSTYPAKGIVADRYPAYLGSAN-RVAQKPANEALAQADVVLFVGNNYPFAE--VSKAFKNTRYFLQIDIDPAKLGKRHKTDIAVLADAQKTLAAILAQVSER-------------------------ESTPWWQANLANVKNWRAYLASLEDKQEGPLQAYQVLRAVNKIAEPDAIYSIDVGDINLNANRHLKLTPSNRHITSNLFATMGVGIPGAIAAKLNYP-ERQVFNLAGDGGASMTMQDLVTQVQYHLPVINVVFTNCQYGFIKDEQEDTNQN------DFIGVEFNDIDFSKIADGVHMQAFRVNKIEQLPDVFEQAKAIAQHEPVLIDAVITGDRPL------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1POX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177085 for 4795 contacts (-36.9/contact) +
2D Compatibility (PS) -57720 + (NN) -22548 + (LL) 8020
1D Compatibility (HY) -14400 + (ID) 6300
Total energy: -270033.0 ( -56.32 by residue)
QMean score : 0.408
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