Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MK-IEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFTSYFLTFEDGARLEIMSRTDVTGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMT---GDGYYESVVLDPEGNRIEITW-
3CT8 Chain:A ((14-146))
NLYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRGKSYKHG--KTYLVFVQTEDRFQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP
General information:
TITO was launched using:
RESULT:
Template:
3CT8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25900 for 823 contacts (-31.5/contact) +
2D Compatibility (PS) -13658 + (NN) -5386 + (LL) 184
1D Compatibility (HY) -1600 + (ID) 1500
Total energy: -47860.0 ( -58.15 by residue)
QMean score : 0.402
(partial model without unconserved sides chains):
PDB file :
Tito_3CT8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CT8-query.scw
PDB file :
Tito_Scwrl_3CT8.pdb
: