Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVGIPILKLGECLLISIQSELDDHTAVEFQEDLLAKIHETSARGVVIDITSIDFIDSFIAKILGDVVSMSKLMGAKVVVTGIQPAVAITLIEL-GITFSG-VLSAMDLESGLEKLKQELGE
2VY9 Chain:A ((6-119))---PILKVDDYWVVAIEETLHDQSVIQFKEELLHNITGVAGKGLVIDISALEVVDSFVTRVLIEISRLAELLGLPFVLTGIKPAVAITLT-EMGLDLRGMATAL-NLQKGLDKLKNLAR-


General information:
TITO was launched using:
RESULT:

Template: 2VY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89483 for 760 contacts (-117.7/contact) +
2D Compatibility (PS) -12022 + (NN) -6319 + (LL) 712
1D Compatibility (HY) -11200 + (ID) 1800
Total energy: -120112.0 ( -158.04 by residue)
QMean score : 0.574

(partial model without unconserved sides chains):
PDB file : Tito_2VY9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VY9-query.scw
PDB file : Tito_Scwrl_2VY9.pdb: