Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVN-NGLHITGVATSEETNKQAQNLGIPLKSLNDVTEIDITIDGADEI-DTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKLVRNLG-KFPLPLEVIPFGWKQVERKLEKEHIQTNLR--KQSSGEVYVTNNGNYILDIVNQTFTDAEMWQEKLAQIPGIVEHGLFLHYVDIIICAKANGEIELIKK
3IXQ Chain:B ((9-218))
-----KVAKE-AVKLVKDGMVIGLGTGSTAALFIRELGNRIREEELTVFGIPTSFEAKMLAMQYEIPLVTL-DEYDVDIAFDGADEVEETTLFLIKGGGGCHTQEKIVDYNANEFVVLVDESKLVKKLGEKFPIPVEVIPSAYRVVIRALSEMGGEAVIRLGDRKRGPV-ITDNGNMIIDVF-MNIDDAIELEKEINNIPGVVENGIFTKVDKVLVGTK----------
General information:
TITO was launched using:
RESULT:
Template:
3IXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118334 for 1786 contacts (-66.3/contact) +
2D Compatibility (PS) -22453 + (NN) -7473 + (LL) 1324
1D Compatibility (HY) -19600 + (ID) 4200
Total energy: -170736.0 ( -95.60 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_3IXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IXQ-query.scw
PDB file :
Tito_Scwrl_3IXQ.pdb
: