Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAENTKNENITNILTQKLIDTRTVLIYGEINQELAEDVSKQLLLLESISNDP---ITIFINSQGGHVEAGDTIHDMIKFIKPTVKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKEIIRMRERINRLIAEATGQSYEQISKDTDRNFWLSVNEAKDYGIVNEIIENRDGLK
2ZL4 Chain:E ((20-192))
------------DIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEA--EDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQ------
General information:
TITO was launched using:
RESULT:
Template:
2ZL4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108815 for 1341 contacts (-81.1/contact) +
2D Compatibility (PS) -18750 + (NN) -5178 + (LL) 800
1D Compatibility (HY) -15600 + (ID) 3750
Total energy: -151293.0 ( -112.82 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_2ZL4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZL4-query.scw
PDB file :
Tito_Scwrl_2ZL4.pdb
: