Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---VKITTASHGGNYNELAKQHGLTKEMVLDFSANINPLGVPASLKQTITANLDKLVEYPEPDYLALRARIASFHQLDLANVIPGNGATELIFGIAKV---TKAQKVLLLAPTFAEYERAFFDAEIVYAELTKETNFAAVEIVLEILERDTEIEAVCLCNPNNPTGQLIAQQEMIKIADLCEKRNIYLIIDEAFMDFLEENETISMINNLERFPHVAIIRAFTKFFAIPGLRLGYLLTKNDLLAEALMQMREPWSINTFADLAGQMLL--EDEAYIRQTFDWINEERDFLYRGLSRFSALTVYRPT-VNYIFFHLEKPLDLRKELLLKGIFIRSCANYRGLTENYYRVAVKSRADNSQLLTALEVIFSGN |
| 1IJI Chain:A ((3-356)) | TVTITDLARENVRNLTPYQSARRLGGNGDVWLNANEYPTAVEFQLTQ------QTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLD--LQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRG-KAIVVADEAYIEFCPQA---SLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA-NEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRDQNKQPSL-SGCLRITVGTREESQRVIDALRAEQV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -266057 for 2878 contacts (-92.4/contact) +
2D Compatibility (PS) -37773 + (NN) -16571 + (LL) 1180
1D Compatibility (HY) -21200 + (ID) 4150
Total energy: -344571.0 ( -119.73 by residue)
QMean score : 0.522
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