Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKENKYDDKHFFEQYSQMPRSKEGLQAAGEWHEFKKLLPDFHQKVVLDLGCGFGWHCIYAAEQGAKKVVGVDLSARMLTEAKHKTTSPI-VHYERRAMENIDIEPETYDIVLSSLALHYVASFNDICQKVNTNLITGGSFVFSVEHPIFTADGRQDWFTDEAGNKLHWPVDRYFNESIRTSHFLGEDVQKYHRTLTTYIQTLLKNGFQINSIIEPEPAPELKDLPEMQDEYRRPMMLIISATKN |
4MWZ Chain:A ((59-126)) | ---------------------------------------------VLDIGSGLGGGCKYINEKYGAHVHGVDICEKMVTIAKLRNQDKAKIEFEAKDILKKDFPESTFDMIYS----------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MWZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36898 for 456 contacts (-80.9/contact) +
2D Compatibility (PS) -7314 + (NN) -2418 + (LL) 11380
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -41550.0 ( -91.12 by residue)
QMean score : 0.607
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