Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MTDKIFQEKVGPVALTIVPTQKYKSNKIVFKFRAPLERETVTKRALLSILLE--TNSEKYPTQTDFRKQLANLYGANFYTTTAKKGNEHVLTVIFDMIDGQYVSDGNHILEDAFAFMEQALFRPNVANDAFNEETLTREKENLKSSLEGIYDDKIRFASKRLVEEMFRDDEFRFGSAGVLEDIDAITAKDLYEYYLQFIAEDTIEIFICGDVTKEEVMPLIEKMAFSPRPERKGIFYTKEAPKEV---RVIHEQQAINQGKLVLGYQTETLFGDDDFVALQLANGLLGGF---------ANSKIFINVREKASLAYYASSRIDSFK--GYMIISAGIDEVNYEQALKIIEEQVVAMKQGNFTDDELNQTKEMLINQLLETNDQAQGLIELVYNNVLRDANL-DLENWIAKIKQATKEEVVAAINK-IKPDTIYFLSKGG-------EELHGKNHI--- |
| 1BGY Chain:A ((1-446)) | TATYAQALQSVPETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPGNALEKEVESM-GAHLNAYSTREHTAYYIKAL------------SKDLPKAVELLADIVQNCS-----LEDSQIEKERDVILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYLSRHYKAPRMVLAAAGGLEHRQLLDLAQKHFSGLSGTYDEDAVPTLSPCRFTGSQICHREDGLPLAHVAIAVEGPG-WAHPDNVALQVANAIIGHYDCTYGGGAHLSSPLASIAATN-KLCQSFQTFNICYADTGLLGAHFVCDHMSIDDMMFVLQGQWMRLCT-SATESEVLRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREVCSKYFYDQCPAVAGFGPIEQLPDYNRIRSGMFWLRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BGY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123884 for 3369 contacts (-36.8/contact) +
2D Compatibility (PS) -44438 + (NN) -23808 + (LL) 912
1D Compatibility (HY) -11200 + (ID) 2550
Total energy: -204968.0 ( -60.84 by residue)
QMean score : 0.446
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