Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VLQTEMKVIQQTEIADK--------------VYELILTGEC-VAGMSPGQFLMLKPSRSD-----------LLMRRPISICSYDKT----AKTCILLYRVE----------GDGTRDFSKLSEGDTIDVLGPLGKGFDIDTTPAPKTALLIGGGIGVPPMYQLGKELAEKG-----VQVMFVNGFQSAKDSFYAQEMAEYG----TV--HIA-TV-D--GSLGTQGFVTDITK-------NFPEEPDVIYSCG-PKAMLQAVKASFPET-KTYLSLEERMACGIGACYACVCPKADDTNKQFKVCEDGPVFRADEVKL |
| 2RC5 Chain:A ((21-303)) | --PYKAKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHSAYPYVIGQSGGVIPPGEDPEKKAKGLADVGYTVRLYSIASPSYSFGMKEDNIEFIIKRDNIYNGNIQFKGVCSNYMCDLKPGDEVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEHKLIKFTGNITLVYGAPYSDELVMMDYLKGLESKHKNFKLITAISREEKNSFDGGRMYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQKISGNTGTYEEFKHHL----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133330 for 1743 contacts (-76.5/contact) +
2D Compatibility (PS) -23427 + (NN) -5192 + (LL) 2400
1D Compatibility (HY) -7600 + (ID) 2100
Total energy: -169249.0 ( -97.10 by residue)
QMean score : 0.471
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