Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEAIKVESLTKNYH----KKRAIENVDLSVNEGELYGFIGPNGAGKSTTIKVLLNFIYATSGGATILGKDV----VKDSAEIKKMVGYVPSEVRYYPQMTANDIIHYAAKFHHI--ENATQKMNKYYEMFSIDPKKRF--GEMSLGNKKKVAIVAGLITEPQLFILDEPTNGLDPLMQHYLFKEMTERNKE-GMTIFLSSHNLREVQEYCTRAAFIRNGNII---AVEDIANQQMTGKVIALKGTNLPLEKLTNAGARIIEK----EMGKARLIF--DDDIKTILPLLQEKEITDLTITNQELED------KFMTLYEGGEIK------------------ |
3TUZ Chain:H ((23-362)) | -HMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131876 for 2207 contacts (-59.8/contact) +
2D Compatibility (PS) -30312 + (NN) -5617 + (LL) 208
1D Compatibility (HY) -16400 + (ID) 3300
Total energy: -187297.0 ( -84.86 by residue)
QMean score : 0.357
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