Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVPFRRTSKAKKRKRRTHVKLQLPGMNECSNCGEYRLSHHVCPECGQYDGKDVANS
2ZJR Chain:Z ((6-57))
--VPKKKTSKSKRDMRRSHHALTAPNLTECPQCHGKKLSHHICPNCGYYDGRQV---
General information:
TITO was launched using:
RESULT:
Template:
2ZJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4972 for 243 contacts (20.5/contact) +
2D Compatibility (PS) -5552 + (NN) -3481 + (LL) 388
1D Compatibility (HY) -2800 + (ID) 1300
Total energy: -7773.0 ( -31.99 by residue)
QMean score : 0.647
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJR-query.scw
PDB file :
Tito_Scwrl_2ZJR.pdb
: