Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKEWKKITAIVLLIIIIAGFFIPVPYYISKPGGTEELAPLVTVDNHPNKKDGSLSLVTIAMGKANIYTYMTAKFLPYHELEKDSEIKYENESDEEYNVRQMQMMNESKNNAIQVAYKAAGQEVKVTYDGVYVLSVKDDVPAADVLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNEQADIKLTAIDKKGTPGIGITLVDDEKITADPTVKIDSEKIGGPSAGLMFSLEIYSRFQKNDLTDGKKIAGTGTIDPDGTVGRIGGIDQKVVAADKSGAKIFFAPNDPITEEMKKSDPSIESNYDTAVKTAKDIDTNMKIVPVKTFQDAVDY-LKKLQ |
| 1RR9 Chain:A ((10-191)) | ---------------------------------------------------------------------------------------------------------------------------------------------------RVGQVTGLAWTEVGGDLLTIETACVPGKGK-LTYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPAAGIAMCTALVSCLTGNPVRAD--VAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIP---------------FENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RR9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3057 for 1561 contacts (-2.0/contact) +
2D Compatibility (PS) -19440 + (NN) -6527 + (LL) 11652
1D Compatibility (HY) -5200 + (ID) 1800
Total energy: -24372.0 ( -15.61 by residue)
QMean score : 0.207
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