Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRVTV---WNEF-LHEKEDDAVLAIYPDGIHGQIASFLEKAGIEAG--TATLEEPEHGLTEEVLANTDVLIWWG-----------HMGHDRVEDKIVDRVQKRVLEGMGLV-VLHSG-----------HMSKIFMRLMGT-SCDLKWREANERERLWVVDPTHPIAKGIGEFIELDEEEMYGEHFDIPTPDELIFLGWFEGGEVFRSGITYKRGNGRIFYF-QPGHESY--PTY-HHPDIQQVIINGVHWCAEGRKNYPAYGNHQPLEKIGRK |
| 2GK3 Chain:A ((11-256)) | LKVLFIGESWHIHMIHSKGYDSFTSSKYEEGATWLLECLRKGGVDIDYMPAHTVQIAFPESIDELNRYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLMIGGYLSFMGIEAKANYKNTVLAEVLPVIMLDGDDRVEKPEGICAEAVSPEHPVVNGFSDYPVFLG------YNQAVARDDADVVLTINNDPLL---VFGEYQQGKTACFMSDCSPHWGTQQFMSWPFYTDLWVNTLQFIARK------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GK3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105335 for 1546 contacts (-68.1/contact) +
2D Compatibility (PS) -23107 + (NN) -6869 + (LL) 924
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: -141837.0 ( -91.74 by residue)
QMean score : 0.283
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