Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKMAVISLVLLLFLVGCGKEEAAQKPEQKTDKEPKIVATTVAITEIMDKLDLPLVGIPSSSKKLPKRYADVKET---GSPMGPDLEIIRMLKPDMVLSTKTLEADLKSGFE-GADLEADFLDFTSIASMQTEIKNLGAKFDRIEEATKLNKDLTSDIDQVKSNVAKKKKPTVLILMGVPGSYLVVTEHAYIGDLVKLAGGENVIKDQKVEYLASNTEYLQSANPDIILRAAHGMPAEVVKMFDEEFKTNDIWKHFDAVKNNRVYDLDENLF---GMTASLNAPEALKEMEKMLYDN
2CHU Chain:A ((10-296))LPISMSDEGDSFLVKDSLGENKIPKNPS-------KVVILDLGILDTFDALKLNDKVVGVPAKNLPKYLQQFKNKPSVGGVQQVDFEAINALKPDLIIISGRQSKFYDKLKEIAPTLFVGLDNANFLSSFENNVLSVAKLYGLEKEALEKISDIKNEIEKAKSIV--DEDKKALIILTNSNKISAFGPQSRFGIIHDVLGINAVDENIKGKSI--NSEFILEKNPDYIFVVDRNVILGNKERAQGILD-NALVAKTKAAQNKKIIYLDPEYWYLASGNGLESLKTMILEIKNAVK--


General information:
TITO was launched using:
RESULT:

Template: 2CHU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90958 for 2261 contacts (-40.2/contact) +
2D Compatibility (PS) -29350 + (NN) -10198 + (LL) 408
1D Compatibility (HY) -8400 + (ID) 2500
Total energy: -140998.0 ( -62.36 by residue)
QMean score : 0.443

(partial model without unconserved sides chains):
PDB file : Tito_2CHU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CHU-query.scw
PDB file : Tito_Scwrl_2CHU.pdb: