Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LTKTLQDRMILPGNGTIPYIGLGVFQVTEQEFIAGAVEKAIEVGYRLFDTAAVYNNEAIVGQAIASS----AVSREELFISSKVWNGDLGYDETLFAFERTLRNLKLDYLDLYLIHWP------------------VAGK--YRDSWRAMERLHDEKLIKSIGVANFKQHHLSDLL--VAANEKPVLNQVETHPLLPQNDLRKYLVEQNIAHAAWSPLAKG----------ILMQNPVITEIAKKHQASVDQVILQWHLNRNTIIFPKSITSSRIEENSRLSYFQLDASDMEKIDRLETGKRVGPDPDDLEYFLSSIERERAYLASENEE |
4GQG Chain:A ((9-291)) | ----------LSTKAKMPIVGLGTWKSPLGK-VKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDDLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPVTNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSPDRPWAKPEDPSLLEDPKIKEIAAKHKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATI------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132654 for 2066 contacts (-64.2/contact) +
2D Compatibility (PS) -25939 + (NN) -5785 + (LL) 3064
1D Compatibility (HY) -24000 + (ID) 5550
Total energy: -190864.0 ( -92.38 by residue)
QMean score : 0.469
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