Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKRGLLLVSVLMLFIFLTVACGSSEDNEESGEISTKEIELTVDDPIIPTDENGEATIEGTVDPKSKLTIDGKAVKKDDSGRFTYTYSLTNDNVAEVDVKLLAVRKNYKDEKYTITITNNSKAYNDNMVKQEAIQKEEAEKAEKERKEAEEKAKQEEEAAAAKAATTDENTPSDDTVYGTLASKDTLTKEGDAFYKDEALDVLYSTVENDEIFQVLIQLGDESTIRKDLDKNHLTELARDYMESDATLIQTVSDESFVYESPSINKTYTVDYMLNDEGYVIAVYVTQAK |
3CMC Chain:Q ((276-307)) | -------------------------------------------EEPLVSRDYNG-STVSSTIDALSTMVIDGKMVK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CMC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 7832 for 116 contacts (67.5/contact) +
2D Compatibility (PS) -3595 + (NN) -3727 + (LL) 18812
1D Compatibility (HY) -2800 + (ID) 700
Total energy: 15822.0 ( 136.40 by residue)
QMean score : 0.255
|
|
|