Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNKRVAFILGGSGGIGKAVVQKLVEQNFAVAV-HYAGNKAKAETLVENIVKSGGEAISVGGDVADEAQMIRAFDFIESQFGGIDVVINTAGIMKLSPIATLDMDDFDLIQRTNVRGTFVVSKQAAL----RVRNGGAIINFSTSVTRTSFPTYGAYVASKAGVESLTLILARELRGKDITVNAVAPGPTATPLFLTGKDDKTID------------NLAKATPLERLGQPEDIAETVAFLAGP-ARWVNGQVIFTNGGLA |
| 1GEG Chain:H ((2-253)) | ---KKVALVTGAGQGIGKAIALRLVKDGFAVAIADY--NDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGV-IWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMW--AEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GEG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117236 for 2073 contacts (-56.6/contact) +
2D Compatibility (PS) -24981 + (NN) -8061 + (LL) 656
1D Compatibility (HY) -15600 + (ID) 4300
Total energy: -169522.0 ( -81.78 by residue)
QMean score : 0.520
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