Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNKRVAFILGGSGGIGKAVVQKLVEQNFAVAV-HYAGNKAKAETLVENIVKSGGEAISVGGDVADEAQMIRAFDFIESQFGGIDVVINTAGIMKLSPIATLDMDDFDLIQRTNVRGTFVVSKQAAL----RVRNGGAIINFSTSVTRTSFPTYGAYVASKAGVESLTLILARELRGKDITVNAVAPGPTATPLFLTGKDDKTID------------NLAKATPLERLGQPEDIAETVAFLAGP-ARWVNGQVIFTNGGLA
1GEG Chain:H ((2-253))---KKVALVTGAGQGIGKAIALRLVKDGFAVAIADY--NDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGV-IWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMW--AEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM-


General information:
TITO was launched using:
RESULT:

Template: 1GEG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117236 for 2073 contacts (-56.6/contact) +
2D Compatibility (PS) -24981 + (NN) -8061 + (LL) 656
1D Compatibility (HY) -15600 + (ID) 4300
Total energy: -169522.0 ( -81.78 by residue)
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_1GEG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GEG-query.scw
PDB file : Tito_Scwrl_1GEG.pdb: