Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --M-RLDKYLKVSRIIKRRPVAKEVADKGRVKVNGVLAKSSTDLKLNDQVEIRFGNKLLTVKVLEMKDSTKKEDAIK-MYEIINETRIETDEQA------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1KSK Chain:A ((1-234)) | GSHMRLDKFIAQQLGVSRAIAGREIR-GNRVTVDGEIVRNAAF-KLLPEHDVAYDGNPL---------AQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KSK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3086 for 440 contacts (-7.0/contact) +
2D Compatibility (PS) -7957 + (NN) 902 + (LL) 1076
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -10965.0 ( -24.92 by residue)
QMean score : 0.413
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