Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MRVSQTYGLVLYNRNYREDDKLVKIFTETEGKRMFFVKHASKSKFNAVLQPLTIAHFILKINDNGLSYIDDYKEVLAFQETNSDLFKLSYASYITSLADVAISDNVADAQLFIFLKKTLELIEDGLDYEILTNIFEVQLLERFGVALNFHDCVFCHRVGLPFDFSHKYSGLLCPNHYYKDERRNHLDPNMLYLINRFQSIQFDDLQTISVKPEMKLKIRQFLDMIYDEYVGIHLKSKKFIDDLSSWGSIMKSD |
| 1U5K Chain:A ((2-244)) | RSRTANRSGIVIRRRVTPAGDIIVTLLTP-QGKLKAIARGGVKGPLSSSLNLFHHVGVQVYQGPHDLASVKQAVLEG-ALPTLAEPERYAFAHLMAEFADALFQEGEFSEQAFDLFAASLRGVAHQPDPEWVALVMSYKLLGLAGVIPQTARCARCGAPD-PEHPDPLGGQLLCSKCAALPP----YPPAVLDFLRHAVRRTVRASFEQPVPSADRPALWRALEKFVTVQVG-GVHSWRQLVPSGV--PVLS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U5K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150983 for 1884 contacts (-80.1/contact) +
2D Compatibility (PS) -25638 + (NN) -7017 + (LL) 620
1D Compatibility (HY) -2400 + (ID) 1900
Total energy: -187318.0 ( -99.43 by residue)
QMean score : 0.436
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