Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRDEVFEKMLELLRQQLGDPQLDITPESSLHDDLAIDSIALTEFIINLEDVFHLEIPDEAVEHMSSVQQLLDYIIEHK
4IHF Chain:K ((8-79))
-------ERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQ
General information:
TITO was launched using:
RESULT:
Template:
4IHF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50675 for 485 contacts (-104.5/contact) +
2D Compatibility (PS) -7953 + (NN) -5907 + (LL) 632
1D Compatibility (HY) -4000 + (ID) 1350
Total energy: -69253.0 ( -142.79 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_4IHF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IHF-query.scw
PDB file :
Tito_Scwrl_4IHF.pdb
: