Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MNKRIFVEKKADFDIKSASLVKELTH---NLQLTSLKDLRIVQVYDVFNLAEDLLARAEKHIFSEQVTDCLLTETEITAELDK--VAFFAIEALPGQFDQRAASSQESLLLLGSDSQVKVNTAQLYLVNKDIAEAELEAVKNYLLN------PVDSRFKDITLPLEEQAFSVSDKTIPSLDFFETYKADDFAAY-KAEQGLAMEVDDLLFIQDYFKSIGRVPTETELKVLDTYWSDHCRHTTFETELKNIDFSASKFQKQLQATYDKYIAMRDELGRSEKPQTLMDMATIFGRYERANGRLDDMEVSDEINACSVEIEVDVDGVKEPWLLMFKNETHNHPTEIEPFGGAATCIGGAIRDP--------LSGRSYVY--------QAMRISGAGDITTPIAETRAGKLPQQVISKTAAHGYSSYGNQIGLATTYVREYFHPGFVAKRMELGAVVGAAPKENVVREKPEAGDVVILLGGKTGRDGVGGATGSSKVQTVESVETAGAEVQKGNAIEERKIQRLFRNGNVTRLIKKSNDFGAGGVCVAIGELADGLEIDLDKVPLKYQGLNGTEIAISESQERMSVVVRPSDVDTFIAACNKENIDAVVVATITAKPNLVMTWDGETIVDLERRFLDTNGVRVVVDAK-----VVDKDLTVPEVRTTSAETLEADTLKVLSDL-NHASQKGLQTIFDSSVGRSTVNHPIGGRYQITPTESSVQKLPVQHGVTTTASVMAQGYNPYIAEWSPYHGAAYAVIEATARLVATGADWSRARFSYQE-YFERMDKQAERFGQPVSALLGSIEAQIQLGLPSIGGKDSMSGTFEEL--TVPPTLVAFGVTTADSRKVLSPEFKAAGENIYYIPGQA-ISEDIDFDLIKANFSQFETIQAQHKITAASAVKYGGVLESLALMTFGNRIGASVEIAELDSSLTAQLGGFVFTSAEEIADSVKIGQTQAAFTLTVNGNDLAGASLLSVFEGKLEEVYPTEFEQADALEEVPAVVSDTVIKAKETIEKPVVYIPVFPGTNSEYD------SAKAFEQVGASVNLVAFVTLNEAAIADSVDTMVANIAKANIIFFAGGFSAADEPDGSAKFIVNILLNKKVRAAIDSFIEKGGLIIGICNGFQALVKSGLLPYGNFEEAGETSPTLFYNDANQHVAKMVETRIANTNSPWLVGVEVGDIHAIPVSHGEGKFVVSASEFAELRDNGQIWSQYVDFDGQPSMDSKYNPNGSVNAIEGITSKNGQIIGKMGHSERWEDGLFQNIPGNKDQALFASAVKYFTGK |
| 4W8J Chain:A ((33-1178)) | YTPIDISLSLTQFLLSEF-VPGAGFVLGLVDIIWGIFGPSQWDAFLVQIEQLINQRIEEFARNQAISRLEGLSNLYQIYAESFREWEADPTNPALREEMRIQFNDMNSALTTAIPLL-AVQNYQVPLLSVYVQAANLHLSVLRDVSVFGQRWGFDAATINSRYNDLTRLIGNYTDYAVRWYNTGLERVWGPDSRDWVRYNQFRRELTLTVLDIVALFPNYDS-RRYPIRTVSQLTREIYTNPVLEN-FDGSFRG---SAQGIERSI---------------RSPHLMDILNSITIYTDAHRG----YYYWSGHQIMASPVGFSGP--EFTFPLYGTMGNAAPQQRIVAQLGQGVYRTLSSTLYRRPFNQQLSVLDGTEFAYGTSSNLPSAVYRKSGTVDSLDEIPPQNNNVPPRQGFSHRLSHVSMFRSGFVSIIRAPMFSWIHR--------------SAEVNNIIASD-----------------------------SITQIP-----AVKGN---------FLFNGSVIS--------GPG--------FTGGDLVRLNSSNIQNRGYIEVPIHFPSTSTRYRVRVRYASVTPIHLNVNWGN-SSIFSNTVPATATSLDNLQSSDFGYFESANAFTGNIVGVRNFSGTAGVIIDRFEFIPVTATLEAEYNLERAQKAVNALFTSTNQLGLKTNVT--------------DYHIDQVSNLVTYLSDEFS--------------------------LDEKRELSEKVKHAKRLSDERNLLQDSNFKDINRERGWGGST--------------GITIQGGDDVFKENYVTLSGTFDESYPTYLYQKID-------ESKLKAFTRYQLRGYIEDSQDLEIYLIRYN-AKHETVNVPGTGSSAH---------------HSHHFSLDIDVG--STDLNEDLGVWVIFKIKTQDGHARLGNLEFLEEKPLVG-------------EALARVKRAEKKWRDKREKLEWETNIVYKEAKESVDALFV--------NSQYDQLQADTNIAMIHAADKRVHSIREAYLPELSVIPGVNAAIFEELEGRIFTAFSLYDAR-----------NVIKNGDFNNGLSSWNVKGHVDVEEQNNQRSVLVVP-------EWEAEVSQEVRVSPGRGYILRVTAYKE---------------------GYGEGSVTIHEIE------NNTDELKFSNPVGYVTKELEYFPET--------------------------DKVWIEIGETEGTFIVDSVELLLMEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4W8J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 40328 for 7734 contacts (5.2/contact) +
2D Compatibility (PS) -101190 + (NN) -3173 + (LL) 15628
1D Compatibility (HY) -30400 + (ID) 8750
Total energy: -87557.0 ( -11.32 by residue)
QMean score : 0.160
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