Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAVFNKLFKRRHSVSEEIKKDDLQEEVEATETEETVEE-----VIEEIP-EKSELELANERADEFENKYLRAHAEMQNIQRRSSEERQQLQR-------YRSQDLAKAILPSLDNLERALAVEG----LTDDVKKGLEMTRDSLIQALKEEGVEEVEVDSFDHNFHMAVQTLPADDEHPADSIAEVFQKGYKLHERLLRPAMVVVYN |
3J6V Chain:K ((25-197)) | ---AGVPAPTIHMSAQQMQDAAAKEEVEKAETPAPAPSRSSFSIYPPIPGQESSLRWAGKKFEEIPIAHIKASYNNTQIHVVSAA-HQPLARASCGTEGFRNAKKGTGIAAQTAGIAAAAKATGKGVTHVRVVVKGLGPGRLSAIKGLTMGGLEVISITDNT--------PIPHNGCRP--------RKARRL-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 101681 for 1163 contacts (87.4/contact) +
2D Compatibility (PS) -15393 + (NN) 3674 + (LL) 3768
1D Compatibility (HY) -2000 + (ID) 1850
Total energy: 89880.0 ( 77.28 by residue)
QMean score : 0.118
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