Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVFEKVQEIIVEELGKDAEEVTLNTTF-DDLDADSLDVFQVISEIEDAFDIQIETEEG--LNTVGDLVAYVEEKVK
4IHF Chain:H ((8-75))
----ERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYING---
General information:
TITO was launched using:
RESULT:
Template:
4IHF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37125 for 426 contacts (-87.1/contact) +
2D Compatibility (PS) -6604 + (NN) -413 + (LL) 948
1D Compatibility (HY) -5600 + (ID) 1450
Total energy: -50244.0 ( -117.94 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_4IHF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IHF-query.scw
PDB file :
Tito_Scwrl_4IHF.pdb
: