Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDTMILNDNHKIPTLGLGTWM---INNDRVAQVVKDAIELGYRHINTAQAYNNEKGVGVGIK----ESGITRESLFVTTKIAAEHKNYESATKSIDQSLEALGLDCIDLMIIHSP---QPWKEWRETDKHFDQGNL
4WRH Chain:A ((10-133))
------LNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFD
General information:
TITO was launched using:
RESULT:
Template:
4WRH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34608 for 751 contacts (-46.1/contact) +
2D Compatibility (PS) -11808 + (NN) 144 + (LL) 648
1D Compatibility (HY) -8800 + (ID) 2300
Total energy: -56724.0 ( -75.53 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_4WRH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WRH-query.scw
PDB file :
Tito_Scwrl_4WRH.pdb
: