Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKVRYGVVSTAKVAPRFIEGVRL-AGNGEVVAVSSRTLESAQAFANKYHL-PKAYDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCN-LFLMEAQKSVFIPMTQVIKKLLASGEIGEVISISSTTAYPNIDHVTWFRELELGGGTVHFMAPYALSYLQYLFDATITHASGTA-TFPK---GQSDSQSKLLLQLSNGVLVDIFLTTRLN--LPHEMIIYGTEGRLIIPHFWKTTHAKLVRNDTSART----I-QVDMVSDFEKEAYHVSQMILEGQRVSHIMTPQLTLSGVKIIEDLYRSWGK |
3MZ0 Chain:A ((1-321)) | -MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALDNHVIGEPLMIHCAHRNPT-VGDNYT-----TDMAVVDTLVHEIDVLHWLVNDDYESVQVIYPKKSKNALPHLKDPQIVVIETKGGIVINAEIYVNCKYGYDIQCEIVGEDGIIKLPEPSSIS---LR-KEGRFSTDILMDWQRRFVAAYDVEIQDFIDSIQKKGE-VSGPTAWDGYIAAVTTDACVKAQES |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MZ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212972 for 2505 contacts (-85.0/contact) +
2D Compatibility (PS) -32514 + (NN) -4574 + (LL) 1616
1D Compatibility (HY) -9200 + (ID) 2650
Total energy: -260294.0 ( -103.91 by residue)
QMean score : 0.447
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