Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKERVDVLAYKQGLFDTREQAKRGVMAGMVINVINGERYDKPGEKVADDTELKLKGEKLKYVSRGGLKLEKALQVFEISVADKLTIDIGASTGGFTDVMLQSGARLVYAVDVGTNQLVWKLRQDHRVRSMEQYNFRYAQKED----FKEGLPEFASIDVSFISL---NLILPALKEILVDGGQVVALIKPQFEAGRE----QIG----KNGIVKDKLVHEKVLTTVTNFTKDYGYTVKHLDFSPIQGGHGNIEFLMHLQKCQDP--QNLVLDQIQDVIEKAHKEFKKNEEE |
| 2YQZ Chain:A ((38-240)) | --------------------------------------------------------------------------------GEEPVFLELGVGTGRIALPLIARG-YRYIALDADAAMLEVF-RQKIAGV---DRKVQVVQADARAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEGWDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRTREVARWREERTPREALEALSERLYSFTQGLPEPVHARVMERLWAWAEAELGD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41057 for 1219 contacts (-33.7/contact) +
2D Compatibility (PS) -19760 + (NN) -6093 + (LL) 6576
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -64884.0 ( -53.23 by residue)
QMean score : 0.377
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